STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK65244.1Cell surface protein. (335 aa)    
Predicted Functional Partners:
KRK65245.1
Cell surface protein.
 
    
0.777
KRK65243.1
Hypothetical protein.
       0.773
KRK65246.1
Cell surface protein precursor.
 
    
0.641
KRK65421.1
Hydrolase.
  
     0.571
KRK65782.1
Cell wall-associated glycoside hydrolase (NLP P60 protein).
  
     0.527
KRK65344.1
Glycerophosphoryl diester phosphodiesterase, membrane domain-containing protein.
  
     0.443
KRK64629.1
Hypothetical protein.
  
     0.410
KRK65242.1
Transcriptional regulator.
  
     0.408
KRK65335.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Lactobacillus tucceti
NCBI taxonomy Id: 1423811
Other names: L. tucceti DSM 20183, Lactobacillus tucceti DSM 20183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.