STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK64877.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
KRK64876.1
Hypothetical protein.
       0.693
KRK63517.1
Hypothetical protein.
  
     0.559
KRK65198.1
Histidine protein kinase plnc8k.
  
     0.556
KRK64880.1
Hypothetical protein.
 
     0.519
KRK64875.1
Lipoprotein.
       0.460
KRK65225.1
Hypothetical protein.
 
     0.422
KRK65199.1
sppR protein.
  
     0.420
KRK64878.1
Hypothetical protein.
       0.400
Your Current Organism:
Lactobacillus tucceti
NCBI taxonomy Id: 1423811
Other names: L. tucceti DSM 20183, Lactobacillus tucceti DSM 20183
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.