Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRL33402.1 | KRL38322.1 | FD20_GL001859 | FD20_GL001939 | DNA-directed DNA polymerase III subunit epsilon. | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | 0.990 |
| KRL33402.1 | KRL38433.1 | FD20_GL001859 | FD20_GL001633 | DNA-directed DNA polymerase III subunit epsilon. | DNA-directed DNA polymerase III alpha subunit. | 0.988 |
| KRL33402.1 | KRL38733.1 | FD20_GL001859 | FD20_GL001451 | DNA-directed DNA polymerase III subunit epsilon. | DNA polymerase III subunit delta. | 0.971 |
| KRL33402.1 | KRL38907.1 | FD20_GL001859 | FD20_GL000983 | DNA-directed DNA polymerase III subunit epsilon. | DNA polymerase III subunit delta. | 0.983 |
| KRL33402.1 | dinG | FD20_GL001859 | FD20_GL000105 | DNA-directed DNA polymerase III subunit epsilon. | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.920 |
| KRL33402.1 | polA | FD20_GL001859 | FD20_GL001320 | DNA-directed DNA polymerase III subunit epsilon. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.762 |
| KRL37388.1 | dinG | FD20_GL000420 | FD20_GL000105 | DNA RNA helicase. | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.954 |
| KRL37388.1 | polA | FD20_GL000420 | FD20_GL001320 | DNA RNA helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.994 |
| KRL37388.1 | rpoA | FD20_GL000420 | FD20_GL000819 | DNA RNA helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| KRL37388.1 | rpoB | FD20_GL000420 | FD20_GL000786 | DNA RNA helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| KRL37388.1 | rpoZ | FD20_GL000420 | FD20_GL001370 | DNA RNA helicase. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
| KRL38322.1 | KRL33402.1 | FD20_GL001939 | FD20_GL001859 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA-directed DNA polymerase III subunit epsilon. | 0.990 |
| KRL38322.1 | KRL38433.1 | FD20_GL001939 | FD20_GL001633 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA-directed DNA polymerase III alpha subunit. | 0.995 |
| KRL38322.1 | KRL38733.1 | FD20_GL001939 | FD20_GL001451 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA polymerase III subunit delta. | 0.998 |
| KRL38322.1 | KRL38907.1 | FD20_GL001939 | FD20_GL000983 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA polymerase III subunit delta. | 0.990 |
| KRL38322.1 | dinG | FD20_GL001939 | FD20_GL000105 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | ATP-dependent helicase DinG; 3'-5' exonuclease. | 0.928 |
| KRL38322.1 | polA | FD20_GL001939 | FD20_GL001320 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
| KRL38322.1 | rpoA | FD20_GL001939 | FD20_GL000819 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.612 |
| KRL38322.1 | rpoB | FD20_GL001939 | FD20_GL000786 | DNA-directed DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for i [...] | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.662 |
| KRL38433.1 | KRL33402.1 | FD20_GL001633 | FD20_GL001859 | DNA-directed DNA polymerase III alpha subunit. | DNA-directed DNA polymerase III subunit epsilon. | 0.988 |
page 1 of 4