STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL39066.1Phosphomevalonate kinase. (363 aa)    
Predicted Functional Partners:
KRL39065.1
Diphosphomevalonate decarboxylase.
 
 0.999
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 0.994
KRL39064.1
Mevalonate kinase.
 
 
0.993
KRL38522.1
hydroxymethylglutaryl-CoA synthase.
 
 
 0.908
KRL37678.1
3-hydroxy-3-methylglutaryl-coenzyme a reductase; Belongs to the HMG-CoA reductase family.
 
 0.902
dinG
ATP-dependent helicase DinG; 3'-5' exonuclease.
       0.600
KRL39062.1
Hypothetical protein.
 
     0.593
KRL38528.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.524
asnS
asparaginyl-tRNA synthetase.
  
    0.430
KRL37702.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
    
 0.422
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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