STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL37309.1Cell surface hydrolase, membrane-bound. (163 aa)    
Predicted Functional Partners:
KRL37308.1
Alpha beta fold family hydrolase.
     0.994
KRL35060.1
Hypothetical protein.
   
 
 0.838
KRL37310.1
Histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
       0.664
KRL38264.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.424
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
    0.421
KRL37544.1
Hypothetical protein.
    
   0.418
KRL37547.1
Hypothetical protein.
    
   0.418
KRL37499.1
Glycosyl transferase, group 1.
    
   0.418
KRL37135.1
Glycosyltransferase.
    
   0.418
KRL37136.1
Glycosyltransferase.
    
   0.418
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.