STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL37330.1Catabolite control protein A. (344 aa)    
Predicted Functional Partners:
KRL38288.1
Glutamate synthase large subunit.
    
 
 0.885
KRL37138.1
Phosphocarrier protein.
   
 
 0.859
KRL37329.1
Xaa-Pro aminopeptidase.
   
 
 0.842
KRL37513.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system eiiabc, sucrose specific.
    
 0.841
KRL37372.1
Beta-glucosides PTS, EIIBCA.
   
 0.841
KRL37378.1
PTD system beta-glucoside-specific transporter subunit EIIBCA.
   
 0.841
KRL37082.1
Phosphoenolpyruvate-dependent sugar PTS family porter EIIABC, trhalose specific.
   
 0.841
KRL36810.1
PTS system sugar-specific transporter subunit EIIA.
    
 0.841
rbsK
Ribokinase family sugar kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.757
KRL38265.1
DeoR family transcriptional regulator.
  
   
 0.659
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.