STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL36818.1Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (351 aa)    
Predicted Functional Partners:
KRL36817.1
Aliphatic sulfonates-binding protein ssuA.
 
     0.822
KRL36814.1
Cystathionine beta-lyase.
   
  0.810
KRL36815.1
Aliphatic sulfonates transport permease ssuC.
 
     0.796
KRL36816.1
Aliphatic sulfonates import ATP-binding protein ssuB.
 
     0.787
KRL36819.1
Cys Met metabolism PLP-dependent enzyme.
      0.721
KRL36820.1
Aminoacylase N-acyl-L-amino acid amidohydrolase hippurate hydrolase.
       0.718
KRL36821.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.649
KRL36822.1
N-acetyltransferase GCN5.
 
     0.579
KRL38431.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.568
KRL37296.1
Fructose-bisphosphate aldolase.
 
   
 0.517
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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