STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL36633.1Lys. (430 aa)    
Predicted Functional Partners:
KRL38459.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.892
guaA
GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.823
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
   
 
 0.812
KRL32614.1
Hypothetical protein.
 
  
 0.805
KRL36627.1
Minor structural protein.
 
     0.713
KRL36632.1
Hypothetical protein.
       0.709
KRL36625.1
Hypothetical protein.
 
  
 0.705
KRL36631.1
Hypothetical protein.
       0.685
KRL38939.1
NlpC P60.
  
  
 0.541
KRL36616.1
Capsid protein.
 
  
 0.531
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.