STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL36519.1GntR family transcriptional regulator. (127 aa)    
Predicted Functional Partners:
KRL36518.1
ABC transporter, ATP-binding protein.
  
 0.992
KRL36517.1
ABC transporter, permease.
 
   
 0.891
KRL36520.1
ABC superfamily ATP binding cassette transporter, permease.
     
 0.806
KRL36521.1
ABC transporter, ATP-binding protein.
  
  
 0.775
KRL36516.1
Hypothetical protein.
 
     0.620
KRL36523.1
ABC transporter, ATP-binding protein.
  
  
 0.530
KRL36515.1
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.511
KRL36522.1
ABC transporter, permease.
       0.470
KRL36514.1
Iron-dependent repressor.
  
    0.456
KRL37341.1
Adenine-specific DNA methylase.
   
    0.447
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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