STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL33927.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
KRL33928.1
Hypothetical protein.
 
     0.939
KRL33926.1
Nicking enzyme TraA protein.
 
     0.884
KRL32670.1
Hypothetical protein.
 
     0.786
KRL32493.1
Hypothetical protein.
 
     0.786
KRL32697.1
Nickase.
 
     0.783
KRL32739.1
Replication initiator A domain protein.
  
     0.748
KRL32887.1
Hypothetical protein.
  
     0.636
KRL33932.1
DNA-damage-inducible protein J.
  
     0.511
KRL33925.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.497
KRL32674.1
Hypothetical protein.
  
     0.478
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.