STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL33470.1Signal transduction histidine kinase. (472 aa)    
Predicted Functional Partners:
KRL33471.1
DNA-binding response regulator.
  0.985
KRL37590.1
Protein-glutamate O-methyltransferase.
   
  0.906
KRL38339.1
Two-component response regulator.
  0.893
KRL33472.1
Hypothetical protein.
 
     0.892
KRL37205.1
Methyl-accepting chemotaxis protein.
   
 0.860
KRL38883.1
Alkaline phosphatase synthesis two-component response regulator.
  0.850
KRL37423.1
Response regulator.
 0.848
KRL36459.1
Winged helix family two component transcriptional regulator.
  0.827
KRL38050.1
Two-component system response regulator.
  0.817
KRL36561.1
DNA-binding response regulator.
  0.796
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.