STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL33027.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
KRL37889.1
Prophage Lp2 protein 59.
 
 
 0.910
KRL37154.1
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.902
KRL33028.1
Endoglucanase Y.
 
 
 0.884
KRL38711.1
Hypothetical protein.
  
 
 0.800
KRL36028.1
Hypothetical protein.
  
 
 0.800
KRL36492.1
Hypothetical protein.
  
 
 0.693
KRL37088.1
Glycoside hydrolase family 8; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
 
 0.687
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.524
KRL33030.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
 
 
 0.498
KRL37092.1
Alpha beta fold family hydrolase.
  
  
  0.474
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.