STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL32776.1Replication protein RepB. (176 aa)    
Predicted Functional Partners:
KRL32777.1
Hypothetical protein.
 
     0.949
KRL32775.1
Hypothetical protein.
       0.631
KRL32774.1
Hypothetical protein.
       0.599
KRL32705.1
Tyrosine recombinase.
  
     0.548
KRL32673.1
Hypothetical protein.
  
     0.468
KRL32906.1
Integrase.
  
     0.459
KRL32778.1
Transposase.
       0.452
KRL32905.1
Hypothetical protein.
  
     0.437
KRL32708.1
RelB.
  
     0.425
Your Current Organism:
Lactobacillus uvarum
NCBI taxonomy Id: 1423812
Other names: L. uvarum DSM 19971, Lactobacillus sp. 8, Lactobacillus uvarum DSM 19971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.