STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM62248.1ABC transporter substrate-binding protein. (271 aa)    
Predicted Functional Partners:
KRM60327.1
Glutamate ABC transporter permease.
 0.993
KRM61230.1
ABC transporter, permease protein.
  0.982
KRM60598.1
Glutamine ABC transporter membrane protein.
 0.980
KRM62026.1
Amino acid ABC transporter permease.
  0.979
KRM61562.1
Glutamine ABC transporter permease.
 0.977
KRM61561.1
Glutamine ABC transporter membrane protein.
 0.973
KRM61217.1
Polar amino acid ABC transporter inner membrane subunit.
 0.789
KRM62392.1
Phosphonate-transporting ATPase.
 0.776
KRM62249.1
Dipeptidase.
  
 
  0.766
KRM61218.1
Polar amino acid transport system permease protein.
  0.757
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
Server load: low (12%) [HD]