STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM60718.1Signal transduction diguanylate cyclase. (358 aa)    
Predicted Functional Partners:
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.947
KRM60326.1
Hypothetical protein.
 
 
0.938
KRM62186.1
Chemotaxis protein CheY.
 
 0.934
KRM61938.1
Chemotaxis protein CheY.
 
 0.934
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.933
KRM61770.1
3,4-dihydroxy-2-butanone 4-phosphate synthase GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
 0.913
KRM62194.1
Hypothetical protein.
  
 0.904
KRM60640.1
Hypothetical protein.
  
 
 0.897
KRM62627.1
Non-specific serine threonine protein kinase.
   
 0.881
KRM61428.1
Cellulose synthase catalytic subunit.
    
 0.857
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.