STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM60894.1ABC transporter, permease protein. (539 aa)    
Predicted Functional Partners:
KRM60895.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    0.981
KRM60893.1
Putative transcription regulator (putative).
 
     0.904
KRM61943.1
Polyketide transporter ATPase component.
 
    0.865
KRM61942.1
Polyketide transporter ATPase component.
    0.635
KRM60763.1
ABC-type multidrug transport system, permease component.
 
    0.464
KRM60762.1
ABC-type multidrug transport system, ATPase component.
    0.456
KRM61861.1
ABC transporter, ATP-binding protein.
    0.435
KRM60896.1
Hypothetical protein.
 
     0.433
KRM60917.1
Hypothetical protein.
 
     0.417
KRM61107.1
Hypothetical protein.
 
     0.417
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.