STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM62181.1HAD superfamily hydrolase. (227 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.897
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.863
KRM60723.1
Kinase, PfkB family protein.
    
  0.745
KRM60853.1
HTH domain protein.
    
  0.745
KRM62300.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.731
KRM61876.1
MIP family glycerol uptake facilitator protein GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.731
KRM62370.1
Glycerol uptake facilitator related permease (major Intrinsic protein family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.731
KRM60606.1
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.565
KRM62465.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
  
 
 0.561
udk
Uridine kinase.
 
 
  0.560
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.