STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM61925.1Signal transduction histidine kinase. (372 aa)    
Predicted Functional Partners:
KRM61924.1
OmpR family DNA-binding response regulator.
 
  0.982
KRM61329.1
Winged helix family two component transcriptional regulator.
 
  0.833
KRM60326.1
Hypothetical protein.
  
 0.826
KRM62301.1
Enoyl-CoA hydratase carnithine racemase.
   
 0.825
KRM60678.1
Two component transcriptional regulator.
 
  0.809
KRM60308.1
Two-component response regulator.
 
  0.808
KRM62145.1
Two-component response regulator.
 
  0.807
KRM61822.1
Winged helix family two component transcriptional regulator.
 
  0.807
KRM61926.1
Metal ion ABC transporter ATPase.
 
     0.805
KRM62365.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
    
 0.802
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.