STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM62023.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
KRM62022.1
Phospholipid-binding protein.
 
     0.795
KRM60888.1
Hypothetical protein; Belongs to the ATP:guanido phosphotransferase family.
  
     0.677
KRM60889.1
Hypothetical protein.
  
     0.677
KRM61946.1
Hypothetical protein.
  
     0.670
KRM60561.1
Hypothetical protein.
  
     0.545
secE
Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.521
KRM60253.1
Hypothetical protein.
  
     0.515
KRM62476.1
Hypothetical protein.
  
     0.509
KRM61193.1
Hypothetical protein.
  
     0.503
KRM62024.1
Hypothetical protein.
       0.473
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.