STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM62717.1Histidine triad domain protein. (131 aa)    
Predicted Functional Partners:
KRM62718.1
Hypothetical protein.
 
     0.885
KRM62716.1
GroES-like protein.
 
     0.873
KRM62715.1
Transporter, major facilitator family protein.
 
     0.813
KRM62714.1
Transcriptional regulator, AraC family.
 
     0.674
KRM62343.1
MutT NUDIX family protein.
  
 0.558
KRM62121.1
Thiol-disulfide isomerase and thioredoxin.
   
  0.525
KRM61604.1
Glutamate synthase subunit beta.
   
 
 0.437
KRM61041.1
Terminase large subunit phage.
  
     0.428
KRM60723.1
Kinase, PfkB family protein.
 
   0.422
KRM62719.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.410
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.