STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM61389.1Putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase. (601 aa)    
Predicted Functional Partners:
KRM62481.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.901
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.736
KRM61388.1
O-acetyltransferase.
 
     0.636
KRM61382.1
Hypothetical protein.
 
     0.450
KRM60700.1
Melibiase subfamily protein.
  
  
 0.416
KRM61018.1
Lysin.
    
 0.402
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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