STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM61431.1Hypothetical protein. (498 aa)    
Predicted Functional Partners:
KRM61430.1
Hypothetical protein.
 
  
 0.962
KRM61432.1
Hypothetical protein.
 
  
 0.960
KRM61429.1
Glycosyltransferase.
 
  
 0.944
KRM61428.1
Cellulose synthase catalytic subunit.
 
   
 0.930
KRM61427.1
GGDEF domain-containing protein.
 
   
 0.925
KRM62407.1
C-di-GMP-specific phosphodiesterase.
  
     0.657
KRM61433.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.618
KRM60711.1
C-di-GMP-specific phosphodiesterase.
  
     0.580
KRM60797.1
C-di-GMP-specific phosphodiesterase.
  
     0.519
KRM62293.1
C-di-GMP-specific phosphodiesterase.
  
     0.513
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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