STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM61645.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
KRM60338.1
Hypothetical protein.
   
 
 0.790
KRM61646.1
Alpha beta fold family hydrolase.
     
 0.550
KRM61647.1
Transcription regulator.
       0.534
KRM60968.1
Hypothetical protein.
   
   0.521
KRM60969.1
Hypothetical protein.
   
   0.521
KRM60971.1
Glycosyltransferase, group 1 family protein.
   
   0.521
KRM60373.1
Glycosyltransferase.
   
   0.521
KRM60374.1
Glycosyltransferase.
   
   0.521
KRM60337.1
Hypothetical protein.
   
   0.521
KRM60340.1
Hypothetical protein.
   
   0.521
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.