STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM62691.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
KRM62690.1
DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
 
  
 0.976
KRM61152.1
Cation transport ATPase.
 
 
 0.959
KRM61326.1
Cadmium transporting P-type ATPase.
 
 
 0.955
KRM62692.1
Transcription regulator.
 
    0.899
KRM61324.1
Putative stress induced DNA binding protein (putative); Belongs to the Dps family.
 
  
 0.898
KRM60935.1
Hypothetical protein.
  
 
 0.859
KRM60747.1
Heavy metal-transporting ATPase.
  
 
 0.839
KRM61737.1
Cadmium zinc cobalt-transporting P-type ATPase.
  
 
 0.839
KRM61299.1
Copper-translocating P-type ATPase.
  
 
 0.839
KRM60913.1
Hypothetical protein.
  
 
 0.820
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.