STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM61233.1Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family. (260 aa)    
Predicted Functional Partners:
KRM61230.1
ABC transporter, permease protein.
 0.972
KRM61229.1
Glutamine ABC transporter, ATP-binding protein GlnQ.
 
 0.936
KRM62026.1
Amino acid ABC transporter permease.
 0.896
KRM60327.1
Glutamate ABC transporter permease.
  0.884
KRM60598.1
Glutamine ABC transporter membrane protein.
  0.863
KRM61562.1
Glutamine ABC transporter permease.
  0.760
KRM62187.1
Glutamate ABC transporter substrate-binding protein.
  
  
  0.737
KRM61227.1
Lyase.
 
     0.734
KRM60328.1
Glutamate ABC transporter substrate-binding protein.
  
  
  0.729
KRM61231.1
Hypothetical protein; Belongs to the bacterial solute-binding protein 3 family.
 
    
0.722
Your Current Organism:
Lactobacillus vaccinostercus
NCBI taxonomy Id: 1423813
Other names: L. vaccinostercus DSM 20634, Lactobacillus vaccinostercus DSM 20634
Server load: low (28%) [HD]