STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ41539.1Putative chlorophyll synthesis pathway protein BchC; COG: COG1063. (339 aa)    
Predicted Functional Partners:
scrK
ROK family protein; COG: COG1940.
 
 
 0.943
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1454; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.925
EEJ41538.1
Glyoxalase family protein.
 
  
 0.896
EEJ40454.1
PTS system Galactitol-specific IIC component; COG: COG3775.
 
 
  0.761
butA2
Acetoin reductase; COG: COG1028.
  
 
 0.751
butA1
Acetoin reductase; COG: COG1028.
 
 
 0.751
fabG
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028.
  
 
 0.640
EEJ40506.1
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; COG: COG1028.
 
 
 0.640
gnd-2
Phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.609
EEJ40232.1
GroES-like protein; COG: COG1063.
  
0.574
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.