STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ41420.1DNA-binding helix-turn-helix protein. (140 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible domain protein CinA; COG: COG1058; Belongs to the CinA family.
    
 0.852
EEJ41419.1
Putative toxin-antitoxin system, toxin component.
  
  
 0.772
EEJ41415.1
Site-specific recombinase, phage integrase family; COG: COG0582; Belongs to the 'phage' integrase family.
 
  
 0.572
EEJ41418.1
Hypothetical protein.
       0.571
EEJ41417.1
Lr1579-like protein.
       0.546
EEJ39801.1
Putative toxin-antitoxin system, toxin component.
 
     0.486
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.