STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrmAMethyltransferase domain protein; COG: COG0500. (291 aa)    
Predicted Functional Partners:
EEJ40941.1
Hypothetical protein; COG: COG0646.
    
 0.671
EEJ41304.1
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
     
 0.648
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1454; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.618
EEJ41302.1
Hypothetical protein; COG: COG2706.
       0.563
EEJ41305.1
FtsK/SpoIIIE family protein; COG: COG1674; Belongs to the FtsK/SpoIIIE/SftA family.
       0.519
EEJ40475.1
Hypothetical protein; COG: COG0340; 6.3.4.15.
     
 0.497
mtnN
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
 0.481
EEJ40995.1
Hypothetical protein.
   
  0.429
EEJ39716.1
Putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase; COG: COG1575.
    
 0.424
cfa
Cyclopropane-fatty-acyl-phospholipid synthase; COG: COG2230.
    
 0.419
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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