STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ41178.1Hypothetical protein; COG: COG0165. (80 aa)    
Predicted Functional Partners:
argG
Argininosuccinate synthase; COG: COG0137; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.998
argH
Argininosuccinate lyase; COG: COG0165.
 
     0.943
arcA
Arginine deiminase; COG: COG2235.
    
 0.905
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 
 0.897
EEJ40227.1
COG: COG1053; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
 0.896
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
  
 0.803
EEJ40526.1
Adenylosuccinate lyase; COG: COG0015.
    
 0.767
purB
Adenylosuccinate lyase; COG: COG0015; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.767
argR
Arginine repressor, C-terminal domain protein; Regulates arginine biosynthesis genes.
  
  
 0.685
argR-2
Arginine repressor, C-terminal domain protein; Regulates arginine biosynthesis genes.
  
  
 0.685
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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