STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ41068.1ABC transporter, substrate-binding protein, family 3; COG: COG0834. (282 aa)    
Predicted Functional Partners:
EEJ41067.1
ABC transporter, permease protein; COG: COG0765.
  0.999
EEJ40850.1
ABC transporter, permease protein; COG: COG0765.
 0.998
EEJ41277.1
ABC transporter, permease protein; COG: COG0765.
 0.996
EEJ41276.1
ABC transporter, permease protein; COG: COG0765.
 0.984
EEJ40851.1
ABC transporter, ATP-binding protein; COG: COG1126.
  
 0.969
EEJ40760.1
ABC transporter, permease protein; COG: COG0765.
  0.960
EEJ40829.1
ABC transporter, permease protein; COG: COG0765.
  0.941
EEJ40852.1
ABC transporter, substrate-binding protein, family 3; COG: COG0834; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.933
EEJ41291.1
ABC transporter, permease protein; COG: COG0765.
 
  0.932
EEJ40217.1
ABC transporter, permease protein; COG: COG0765.
  0.917
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.