STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ40945.1Hypothetical protein; COG: COG2431. (80 aa)    
Predicted Functional Partners:
EEJ40950.1
Polyphosphate kinase domain protein; COG: COG0855.
  
     0.772
EEJ40974.1
Hypothetical protein; COG: COG3101.
 
     0.756
EEJ40951.1
Formate dehydrogenase N, transmembrane.
  
     0.755
EEJ40940.1
MtfA domain protein; COG: COG3228; Belongs to the MtfA family.
  
     0.673
EEJ40953.1
Diaminopimelate epimerase family protein; COG: COG0253.
 
     0.492
EEJ40955.1
Tyrosine phosphatase; COG: COG0394.
  
     0.440
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.