STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galUUTP--glucose-1-phosphate uridylyltransferase; COG: COG1210. (300 aa)    
Predicted Functional Partners:
galE
UDP-glucose 4-epimerase; COG: COG1087; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.986
EEJ40809.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; COG: COG1109.
    
 0.978
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG4468.
     
 0.955
galE-2
NAD dependent epimerase/dehydratase family protein; COG: COG0451.
 
 0.953
gtfA
Sucrose phosphorylase; COG: COG0366.
    
 0.945
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
   
 0.831
pgi
Putative glucose-6-phosphate isomerase; COG: COG0166; Belongs to the GPI family.
 
 
 
 0.766
pcrA
ATP-dependent DNA helicase PcrA; COG: COG0210.
      0.747
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
 
  
 0.741
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; COG: COG0240; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.734
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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