STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ40627.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
EEJ40353.1
Cobalt transport protein.
  
 
 0.829
EEJ40138.1
Cobalt transport protein; COG: COG0619.
  
 
 0.829
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
 0.794
EEJ40137.1
ABC transporter, ATP-binding protein; COG: COG1122.
   
 
 0.794
EEJ40557.1
Hypothetical protein.
  
     0.541
EEJ39893.1
Hypothetical protein.
  
     0.531
EEJ40169.1
Bacterial membrane protein YfhO.
  
     0.525
EEJ40289.1
DHHA1 domain protein.
  
     0.512
EEJ40558.1
Hypothetical protein.
  
     0.498
EEJ40776.1
Hypothetical protein.
  
     0.480
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.