STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ40283.1ABC transporter substrate binding protein; COG: COG2984. (329 aa)    
Predicted Functional Partners:
EEJ40282.1
Branched-chain amino acid ABC transporter, permease protein; COG: COG4120; Belongs to the binding-protein-dependent transport system permease family.
    0.998
EEJ40281.1
ABC transporter, ATP-binding protein; COG: COG1101.
 
    0.973
EEJ40280.1
Hypothetical protein.
       0.565
EEJ40004.1
Hypothetical protein.
    
  0.518
EEJ40279.1
Transcriptional regulator, ArsR family.
       0.496
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.