STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPolyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (364 aa)    
Predicted Functional Partners:
EEJ40295.1
ABC transporter, permease protein; COG: COG1176.
 0.999
EEJ40296.1
ABC transporter, permease protein; COG: COG1177.
 
 0.999
EEJ40297.1
ABC transporter, solute-binding protein; COG: COG0687.
 
 0.999
cydD
Thiol reductant ABC exporter, CydD subunit; COG: COG4988.
 
     
0.887
cydC
Thiol reductant ABC exporter, CydC subunit; COG: COG4987.
 
     
0.787
EEJ41356.1
DNA internalization competence protein ComEC/Rec2-like protein; COG: COG2333.
  
  
 0.735
EEJ41551.1
Efflux ABC transporter, permease protein.
 
 
    0.719
EEJ40338.1
ABC transporter, substrate-binding protein, QAT family; COG: COG1732.
 
 
  0.699
EEJ40968.1
Putative sulfate transport system permease protein CysT; COG: COG0555.
   
  0.551
EEJ40293.1
Hypothetical protein.
       0.542
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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