STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhA1GroES-like protein; COG: COG1064. (340 aa)    
Predicted Functional Partners:
adh2
Aldehyde dehydrogenase (NAD) family protein; COG: COG1454; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.991
adh
Zinc-binding alcohol dehydrogenase family protein; COG: COG1064.
  
  
 
0.874
EEJ40609.1
Hypothetical protein; COG: COG1454.
  
 0.841
dhaT
1,3-propanediol dehydrogenase; COG: COG1454.
  
 0.841
xylB2
GroES-like protein; COG: COG1062.
 
 
0.743
EEJ40232.1
GroES-like protein; COG: COG1063.
 
 
0.739
xylB1
GroES-like protein; COG: COG1062.
 
 
0.727
butA2
Acetoin reductase; COG: COG1028.
   
 0.610
butA1
Acetoin reductase; COG: COG1028.
   
 0.610
EEJ40155.1
Beta-lactamase.
       0.445
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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