STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ40059.1Hypothetical protein; Similar to lr1393. (120 aa)    
Predicted Functional Partners:
EEJ40691.1
Hypothetical protein.
  
    0.707
EEJ40060.1
Oxidoreductase, NAD-binding domain protein; COG: COG0673.
       0.684
EEJ40061.1
DEAD/DEAH box helicase; COG: COG0513.
       0.679
EEJ40306.1
Hypothetical protein.
  
     0.676
EEJ40732.1
Tetratricopeptide repeat protein.
  
     0.651
EEJ39911.1
Hypothetical protein.
  
     0.644
EEJ39961.1
Hypothetical protein.
  
     0.638
EEJ41340.1
Hypothetical protein.
  
     0.631
EEJ39910.1
Hypothetical protein.
  
     0.566
EEJ41205.1
Hypothetical protein.
  
     0.543
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.