STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ39856.1Peptidase propeptide and YPEB domain protein. (115 aa)    
Predicted Functional Partners:
EEJ40019.1
Hypothetical protein.
  
     0.683
EEJ39857.1
Thioredoxin; COG: COG0526.
       0.614
EEJ41228.1
Hypothetical protein.
  
    0.598
EEJ40438.1
Hypothetical protein.
  
     0.578
EEJ40439.1
Hypothetical protein.
  
     0.539
EEJ41200.1
Hypothetical protein.
  
     0.537
EEJ40159.1
Transcriptional regulator, TetR family.
  
     0.531
EEJ39858.1
tRNA binding domain protein; COG: COG0073; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.513
EEJ39961.1
Hypothetical protein.
  
     0.504
EEJ40792.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Lactobacillus vaginalis
NCBI taxonomy Id: 1423814
Other names: L. vaginalis DSM 5837 = ATCC 49540, Lactobacillus vaginalis ATCC 49540, Lactobacillus vaginalis ATCC 49540 = DSM 5837, Lactobacillus vaginalis DSM 5837, Lactobacillus vaginalis DSM 5837 = ATCC 49540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.