STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL67629.1ComG operon protein 1. (322 aa)    
Predicted Functional Partners:
KRL67628.1
ComG operon protein 2.
 
 
 0.997
KRL67627.1
Pilin-like component of the DNA transport membrane platform.
  
  
 0.978
KRL67709.1
DNA helicase.
   
  
 0.843
KRL67626.1
Hypothetical protein.
       0.773
KRL67867.1
Hypothetical protein.
 
  
 0.750
KRL67869.1
Competence protein CelA.
  
  
 0.701
KRL67630.1
Hypothetical protein.
       0.687
KRL66204.1
DNA processing protein.
 
  
 0.641
KRL67262.1
Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
  
 0.621
KRL67623.1
Adenine-specific DNA methyltransferase.
       0.611
Your Current Organism:
Lactobacillus versmoldensis
NCBI taxonomy Id: 1423815
Other names: L. versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis DSM 14857, Lactobacillus versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis KCTC 3814, Lactobacillus versmoldensis KCTC 3814 = DSM 14857
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