STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL67647.1GNAT family acetyltransferase. (197 aa)    
Predicted Functional Partners:
KRL66416.1
Hypothetical protein.
  
  
 0.589
KRL65478.1
Hypothetical protein.
  
     0.534
KRL66811.1
Dihydrofolate reductase.
   
    0.517
KRL67637.1
Sodium hydrogen exchanger.
  
     0.515
KRL67862.1
Hydrolase.
  
     0.498
KRL66937.1
Hypothetical protein.
   
    0.470
KRL67926.1
Rod shape-determining protein MreD.
  
     0.460
KRL67308.1
Hypothetical protein.
  
     0.453
KRL68523.1
Hypothetical protein.
  
     0.446
KRL66282.1
Hypothetical protein.
  
     0.433
Your Current Organism:
Lactobacillus versmoldensis
NCBI taxonomy Id: 1423815
Other names: L. versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis DSM 14857, Lactobacillus versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis KCTC 3814, Lactobacillus versmoldensis KCTC 3814 = DSM 14857
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.