STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL67464.1NADH flavin oxidoreductase. (391 aa)    
Predicted Functional Partners:
KRL66365.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 0.942
KRL66651.1
FAD binding domain protein.
 
  
  0.493
KRL67383.1
Hypothetical protein.
    
 0.460
KRL67463.1
Aminotransferase.
       0.456
KRL68158.1
Nitroreductase (oxidoreductase); Belongs to the flavin oxidoreductase frp family.
  
 
  0.422
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.412
KRL66979.1
Acetyl-CoA carboxylase, biotin carboxylase.
   
 
  0.408
KRL67503.1
Nitrate reductase, alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
  0.405
KRL67619.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.402
KRL67318.1
Thioredoxin reductase.
  
 
 0.400
Your Current Organism:
Lactobacillus versmoldensis
NCBI taxonomy Id: 1423815
Other names: L. versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis DSM 14857, Lactobacillus versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis KCTC 3814, Lactobacillus versmoldensis KCTC 3814 = DSM 14857
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