STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL67037.1Iron(III)-compound ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (315 aa)    
Predicted Functional Partners:
KRL67039.1
Iron(III)-compound ABC transporter ATP-binding subunit.
 0.993
KRL67040.1
Ferrichrome ABC transporter substrate binding lipo protein.
 
 0.978
KRL67508.1
Iron ABC transporter ATP-binding protein.
 0.976
KRL67509.1
iron(III) ABC transporter substrate binding component.
 
 0.945
KRL67038.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.857
KRL66730.1
Hypothetical protein.
  
 0.831
KRL67036.1
Hypothetical protein.
       0.576
KRL68228.1
uroporphyrinogen-III C-methyltransferase.
     
 0.444
Your Current Organism:
Lactobacillus versmoldensis
NCBI taxonomy Id: 1423815
Other names: L. versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis DSM 14857, Lactobacillus versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis KCTC 3814, Lactobacillus versmoldensis KCTC 3814 = DSM 14857
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.