STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL07617.1Na+ xyloside symporter related transporter. (477 aa)    
Predicted Functional Partners:
uxaC
Glucuronate isomerase.
     
 0.578
KRL15022.1
O-glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
     0.547
KRL12165.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.474
KRL07618.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.404
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.