STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL07372.1Hypothetical protein. (561 aa)    
Predicted Functional Partners:
KRL08690.1
Outer membrane protein.
  
     0.611
KRL12490.1
Hypothetical protein.
  
     0.579
KRL09598.1
Hypothetical protein.
  
     0.553
KRL11170.1
Hypothetical protein.
  
     0.548
KRL15054.1
Hypothetical protein.
  
     0.546
KRL13541.1
Hypothetical protein.
  
     0.530
KRL13542.1
Hypothetical protein.
  
     0.521
KRL12491.1
Hypothetical protein.
  
     0.509
KRL07371.1
DNA repair ATPase; May be involved in recombinational repair of damaged DNA.
       0.468
KRL08198.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.