STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL15119.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
KRL15118.1
Cell surface protein.
 
  
 0.881
KRL10689.1
Hypothetical protein.
 
 0.878
KRL13541.1
Hypothetical protein.
 
 0.849
KRL06848.1
Hypothetical protein.
 
 0.815
KRL08690.1
Outer membrane protein.
 
 0.806
KRL13542.1
Hypothetical protein.
 
 0.781
KRL12489.1
Cell surface protein.
 
  
 0.765
KRL09605.1
Hypothetical protein.
 
 0.747
KRL15624.1
Hypothetical protein.
 
  
 0.743
KRL06752.1
Outer membrane protein.
 
 0.722
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.