STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13671.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
KRL13672.1
Hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.813
KRL12487.1
Hypothetical protein.
  
     0.715
KRL07357.1
dUTPase.
  
     0.714
KRL13670.1
Hydrolase, NUDIX family.
       0.615
KRL09530.1
Hypothetical protein.
  
     0.538
KRL13673.1
Transcriptional regulator.
       0.531
KRL16313.1
Hypothetical protein.
  
     0.521
KRL15029.1
Transcriptional regulator.
  
     0.513
KRL10692.1
Hypothetical protein.
  
     0.512
KRL15054.1
Hypothetical protein.
 
     0.482
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.