STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13576.1FMN-binding domain-containing protein. (495 aa)    
Predicted Functional Partners:
KRL11404.1
NADH flavin oxidoreductase.
 
  
 0.886
KRL13577.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
 
     0.804
KRL12684.1
Dihydropyrimidine dehydrogenase subunit B.
  
 
 0.790
KRL15441.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
  
 0.626
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.585
atpA
F0F1-type ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
  
 0.529
atpC
F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.508
KRL07597.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.507
KRL12504.1
NADH flavin oxidoreductase NADH oxidase.
  
 
 0.485
KRL08710.1
L(+)-tartrate dehydratase, subunit b.
  
  
 0.458
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.