STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12490.1Hypothetical protein. (546 aa)    
Predicted Functional Partners:
KRL12488.1
Hypothetical protein.
 
     0.829
KRL15054.1
Hypothetical protein.
  
     0.774
KRL08690.1
Outer membrane protein.
  
     0.774
KRL13685.1
Signal transduction protein.
  
     0.754
KRL06752.1
Outer membrane protein.
  
     0.753
KRL10842.1
NRPS condensation (elongation) domain-containing protein.
  
     0.727
KRL15119.1
Hypothetical protein.
 
 0.714
KRL15569.1
Hypothetical protein.
  
     0.707
KRL11294.1
Hypothetical protein.
  
    0.687
KRL09598.1
Hypothetical protein.
  
     0.687
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.