STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09589.1Signal transduction histidine kinase. (391 aa)    
Predicted Functional Partners:
KRL09588.1
DNA-binding response regulator.
 
 0.985
KRL10806.1
DNA-binding response regulator.
 
 0.885
KRL07330.1
DNA-binding response regulator.
 
 0.874
KRL15380.1
DNA-binding response regulator.
 
 0.859
KRL13168.1
DNA-binding response regulator.
 
 0.847
KRL16370.1
Response regulator.
 
 0.813
KRL15018.1
DNA-binding response regulator.
 
 0.779
KRL09590.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.716
KRL08728.1
DNA-binding response regulator.
 
 0.665
KRL15140.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.