STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK99573.1Acetyltransferase. (198 aa)    
Predicted Functional Partners:
KRK95479.1
Hypothetical protein.
 
      0.618
rsgA
GTP-binding protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
    0.565
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
  
  0.560
KRK98393.1
Hypothetical protein.
    
 0.505
KRK90576.1
GCN5-related N-acetyltransferase.
 
  
 0.505
KRK96621.1
Arginase; Belongs to the arginase family.
 
  
  0.484
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
    
  0.464
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
  0.461
KRK92033.1
GNAT family acetyltransferase.
    
 0.459
KRK98414.1
Acetyltransferase.
 
  
 0.459
Your Current Organism:
Lactobacillus futsaii
NCBI taxonomy Id: 1423818
Other names: L. futsaii JCM 17355, Lactobacillus futsaii JCM 17355, Lactobacillus futsaii YM 0097, Lactobacillus sp. YM 0097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.